Source code for qcportal.gridoptimization.dataset_models

from typing import Dict, Any, Union, Optional, Iterable

try:
    from pydantic.v1 import BaseModel, Extra
except ImportError:
    from pydantic import BaseModel, Extra
from typing_extensions import Literal

from qcportal.dataset_models import BaseDataset
from qcportal.gridoptimization.record_models import (
    GridoptimizationRecord,
    GridoptimizationSpecification,
)
from qcportal.metadata_models import InsertMetadata
from qcportal.molecules import Molecule


[docs] class GridoptimizationDatasetNewEntry(BaseModel): class Config: extra = Extra.forbid name: str initial_molecule: Union[Molecule, int] additional_keywords: Dict[str, Any] = {} additional_optimization_keywords: Dict[str, Any] = {} attributes: Dict[str, Any] = {} comment: Optional[str] = None
[docs] class GridoptimizationDatasetEntry(GridoptimizationDatasetNewEntry): initial_molecule: Molecule
[docs] class GridoptimizationDatasetSpecification(BaseModel): class Config: extra = Extra.forbid name: str specification: GridoptimizationSpecification description: Optional[str] = None
[docs] class GridoptimizationDatasetRecordItem(BaseModel): class Config: extra = Extra.forbid entry_name: str specification_name: str record_id: int record: Optional[GridoptimizationRecord]
[docs] class GridoptimizationDataset(BaseDataset): dataset_type: Literal["gridoptimization"] = "gridoptimization" # Needed by the base class _entry_type = GridoptimizationDatasetEntry _new_entry_type = GridoptimizationDatasetNewEntry _specification_type = GridoptimizationDatasetSpecification _record_item_type = GridoptimizationDatasetRecordItem _record_type = GridoptimizationRecord
[docs] def add_specification( self, name: str, specification: GridoptimizationSpecification, description: Optional[str] = None ) -> InsertMetadata: spec = GridoptimizationDatasetSpecification(name=name, specification=specification, description=description) return self._add_specifications(spec)
[docs] def add_entries( self, entries: Union[GridoptimizationDatasetNewEntry, Iterable[GridoptimizationDatasetNewEntry]] ) -> InsertMetadata: return self._add_entries(entries)
[docs] def add_entry( self, name: str, initial_molecule: Union[Molecule, int], additional_keywords: Optional[Dict[str, Any]] = None, additional_optimization_keywords: Optional[Dict[str, Any]] = None, attributes: Optional[Dict[str, Any]] = None, comment: Optional[str] = None, ): if additional_keywords is None: additional_keywords = {} if additional_optimization_keywords is None: additional_optimization_keywords = {} if attributes is None: attributes = {} ent = GridoptimizationDatasetNewEntry( name=name, initial_molecule=initial_molecule, additional_keywords=additional_keywords, additional_optimization_keywords=additional_optimization_keywords, attributes=attributes, comment=comment, ) return self.add_entries(ent)